Spaces:
Sleeping
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·
7ac370b
1
Parent(s):
694c1c6
update app.py
Browse files
app.py
CHANGED
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import gradio as gr
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return "Hello " + name + "!!"
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import gradio as gr
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import pandas as pd
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import numpy as np
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import matplotlib.pyplot as plt
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from constants import *
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from mpl_data_plotter import MatplotlibDataPlotter
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single_df = pd.read_csv(SINGLE_DOMAINS_FILE, compression='gzip')
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single_df['biosyn_class_index'] = single_df.bgc_class.apply(lambda x: BIOSYN_CLASS_NAMES.index(x))
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pair_df = pd.read_csv(PAIR_DOMAINS_FILE, compression='gzip')
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pair_df['biosyn_class_index'] = pair_df.bgc_class.apply(lambda x: BIOSYN_CLASS_NAMES.index(x))
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# unique_domain_lengths = single_df.dom_location_len.unique()
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num_domains_in_region_df = single_df.groupby('cds_region_id', as_index=False).agg({'as_domain_id': 'count'}).rename(
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columns={'as_domain_id': 'num_domains'})
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unique_domain_lengths = num_domains_in_region_df.num_domains.unique()
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data_plotter = MatplotlibDataPlotter(single_df, pair_df, num_domains_in_region_df)
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def update_all_plots(frequency, split_name='stratified'):
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return data_plotter.plot_single_domains(frequency, split_name), data_plotter.plot_pair_domains(frequency, split_name)
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# Create Gradio interface
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with gr.Blocks(title="Interactive Wave Plotter") as demo:
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gr.Markdown("## Interactive Wave Plotter")
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gr.Markdown("Adjust the slider to change the frequency of all waves simultaneously.")
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with gr.Row():
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frequency_slider = gr.Slider(
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minimum=unique_domain_lengths.min(),
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maximum=unique_domain_lengths.max(),
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step=1,
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value=unique_domain_lengths.min(),
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label="Min number of domains"
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)
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with gr.Row():
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with gr.Column():
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single_domains_plot = gr.Plot(
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label="Single domains",
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container=True,
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elem_id="single_domains_plot"
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)
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# gr.HTML("""
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# <style>
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# #single_domains_plot {
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# height: 100% !important;
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# width: 100% !important;
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# }
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# </style>
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# """)
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with gr.Column():
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pair_domains_plot = gr.Plot(label="Pair domains")
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# with gr.Column():
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# combined_plot = gr.Plot(label="Combined Wave")
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frequency_slider.release(
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fn=update_all_plots,
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inputs=[frequency_slider],
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outputs=[single_domains_plot, pair_domains_plot]#, cosine_plot]
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)
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demo.launch()
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# demo.load(filter_map, [min_price, max_price, boroughs], map)
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