update

affinity_results.csv

@@ -3,9 +3,13 @@ AAC,1.6836684522779068,1.948252710023093,1.9442038635765504,1.9305996995916217,1
 APAAC,1.7565429731688522,1.8770061885323133,1.7567834978278685,1.9385566106194043,1.714857365616508,1.4987285962293615,1.7389881256685311,1.984051908385338,1.810790729012928,1.824197590116164,10.23108239771469,10.339208512311554,9.883431537832587,10.739856159015297,9.905499532881846,9.47903038315344,10.167629594856429,10.826504979185367,10.267876565485246,10.427031320406634,45.48579437999399,51.844779106353975,49.05676166611105,48.40315758901779,45.8192602085,53.640803260196265,54.31488893581119,39.71383391744224,49.1341319203262,39.833444697791016
 LEARNED-VEC,1.0166950258016765,1.1613478810781346,1.2798630623259457,1.2273075116153032,1.1710907787455025,1.0471667910216833,1.250117233254529,1.2537393650695414,1.1330767812255402,1.3073549688966513,7.483916820381271,8.120023381777553,8.065292109908393,8.125022283789175,8.318308391314726,7.865723563652198,8.248700158129466,8.79323597023734,7.71576708799199,8.572172639360698,73.20243723098751,72.13043634429827,67.93002026184989,71.6394010912154,70.65338028464627,71.6842907514193,70.55848645016663,66.96668749264833,72.8684000399552,65.81644921050717
 PROTVEC,0.9450784683700996,1.1079794765340996,1.1841380227796112,1.3058826287165382,1.0947666930043116,1.077726442398198,1.134837126432029,1.1585300412488495,1.1541626533177771,1.1775252431706766,7.703737329037653,8.023557653957205,8.23140246734663,8.616002115044205,7.90027975146646,7.859473060140459,7.918496499430011,8.399731001183666,8.026435222174825,8.21033705333975,75.46118716490062,73.61078083106167,70.81617012381439,69.41747699668541,72.93121739855131,71.14312215364784,73.6838457266331,70.01229221908699,72.09471755875367,69.94027448059606
+XLNET,0.5755701569694394,0.6829608546778123,0.5698319596854814,0.7123793002064035,0.5878760430877223,0.512662566190357,0.6956264450227203,0.6557132743531173,0.5206136017737155,0.5544770822654249,5.712806285143976,6.1163278305725335,5.49805228296072,6.026315722195936,5.722242821158825,5.331992957250986,5.824786818386832,5.876339115169603,5.408661259148206,5.483145068459909,85.99513660996571,84.9212093792428,87.26173718011394,84.68160092309792,86.54096875801862,87.31780616977595,84.85606634334492,84.29544938391241,88.5417519567796,87.11957072581382
+T5,0.5420257866975313,0.5379780353141523,0.5276031012315961,0.5873620649955719,0.5311363037660035,0.5045555334336093,1.043042542235276,0.5180993370332959,0.6573077073185841,0.585780609354982,5.409784939039577,5.470758471550832,5.239654730922923,5.719940950490855,5.323067992381199,5.1160633750154005,5.682376178570021,5.473451576369674,5.595246519053815,5.589384893466554,86.96699988331221,88.40427909228745,88.37802142247085,87.55621573204529,87.91087073605944,87.65868363369643,80.1682083233928,87.89000682328772,85.33267451857591,86.32520013005221
+SEQVEC,0.48502687629268826,0.5891293710389134,0.5389950466321947,0.6008960241488477,0.5118265717285677,0.48295951852870306,0.5873263197580126,0.5866599413281882,0.4986661814714978,0.44909832457875243,5.183610236041347,5.630843799991888,5.0921696315336735,5.296862607425337,5.274797690149691,5.11427027769054,5.296176467128774,5.45954191417447,5.082051445380166,4.992459336632331,88.39153879800544,87.1984654564511,88.12974656562812,87.24047507815762,88.3799171952814,88.19884411821619,87.53728614650223,86.16784622993453,89.12344651384129,89.78086795399098
 K-SEP,0.8196744266002179,1.074306414112759,1.0746759094033314,1.0722090461075662,0.8464572631270224,0.9899197313770788,0.8562282685020859,1.137318372472507,0.9811060015569966,0.8531479523778168,6.839081508689487,7.606412609738077,7.254431185202578,7.621368662456822,6.7473827951804415,7.267058986979571,6.77266813572676,7.9301644000060945,7.0559291847100445,6.978652675065574,76.65588827797912,76.60451232170978,74.10873754738081,74.23029921676283,79.88246706243868,72.71787652003002,81.28571846337695,70.60006391754554,76.90426021767885,78.27444422035154
 PFAM,2.1080725198514347,2.369754712761041,2.2731113271623857,2.4244058851458106,2.2812349641007827,2.058992245277642,2.2549504748938407,2.227671872078743,2.342702528711832,2.237944953316925,11.52857117604614,12.11338292260863,11.882771916456878,12.039007576256228,11.845835274023052,10.687140707127533,11.633480368842434,11.645657028120104,11.767189767182586,11.78415678171764,20.68227836841265,14.84579329018725,20.24303718245925,18.724083279941368,16.65601384795393,25.24857698773339,30.143319785255475,13.688194110801057,15.515494156852627,15.969526172946502
 CPC-PROT,0.6132923891655304,0.7383690406189392,0.854580668203925,0.8085564883525252,0.6630050446682798,0.6216540039121198,0.8038808193439283,0.8268188836221447,0.6645502340661645,0.7042884516313144,5.881050080101815,6.514593473805178,6.238775391155871,6.50379459520604,6.373199381391344,5.8088097817297575,6.22007014741879,6.900368108365126,5.966783739658138,6.201759249366912,84.87350301445986,83.36783829331034,80.27824063259715,82.34175220243759,84.83824043817665,84.40873899184064,82.56801571017213,79.89954017559793,85.02296786755848,83.3210229375215
 ESM1B,0.4501632357515115,0.4931685122190886,0.4342063947961432,0.6219657551133925,0.4765621921400595,0.4885880235501958,0.4353114650373037,0.5498292274066061,0.4147217685647806,0.463861998351069,4.894547874167513,5.203314895183273,4.838902254659487,5.2990211452700455,4.84031555713316,5.21329156401347,4.819886108550963,5.166240343717914,4.74591878899035,4.997553663652746,89.40086106558063,89.36833766938152,90.39422055507232,86.79455334095793,89.23485440587977,88.09136972044107,90.79110553033752,87.08091199365148,90.93090089329034,89.41807240135532
 BERT-BFD,0.4448170306499859,0.6113873585409764,0.9263628408525268,0.566966821296589,0.4865992993127356,0.5296277777040057,0.6718579089390813,0.5552718234393493,0.4637340397597387,0.4791613281827077,4.890892216528142,5.725314337921713,5.331701983586552,5.4013836359968685,4.978715679852711,5.043597335485322,5.207437918116837,5.471131059610876,4.908035696912318,5.159425224837213,89.37825283303883,86.70973091060092,82.06118288446257,88.04721715337493,89.03081993312291,87.1813995197648,85.64658827183871,86.91992905407324,89.90154296718104,89.10437015952141
-SEQVEC,0.48502687629269425,0.5891293710389236,0.5389950466321961,0.6008960241488281,0.5118265717285697,0.4829595185287106,0.5873263197580333,0.5866599413281663,0.4986661814714904,0.4490983245787512,5.183610236041411,5.630843799991941,5.09216963153373,5.296862607425296,5.274797690149766,5.114270277690617,5.296176467128838,5.4595419141744,5.082051445380157,4.992459336632367,88.3915387980053,87.19846545645089,88.12974656562808,87.24047507815804,88.37991719528137,88.19884411821597,87.53728614650171,86.16784622993504,89.12344651384151,89.780867953991
+ALBERT,0.3638181205913795,0.4145647246485391,0.4225723542199757,0.4180755688485064,0.3769070687806279,0.3852427891983035,0.5337044026317138,0.5152892577551236,0.3162150639020638,0.436315750614734,4.543807213743451,4.620814350874956,4.636323440900794,4.629862301306496,4.461181070205814,4.421142619645884,4.6010953004192805,4.921624323959039,4.130872146074636,4.761171578466708,91.41677745489476,91.1051844116328,90.86037597307644,91.32274597303368,91.58826969526775,90.75900449225074,88.76217972239687,87.93674496085819,93.29342280244214,90.06659502854613
+UNIREP,0.6602929386622981,0.7621656898469429,0.6860100830018877,0.732935263014279,0.6839523032817156,0.658095858545504,0.7120406144086044,0.8880543034438837,0.7610722111587395,0.776348869525036,6.210118587460963,6.694844926602742,6.144275808273184,6.324277753011004,6.402114111730377,6.065039003093328,6.079506587122322,7.049278960256014,6.301896456461216,6.602531905287829,83.61027109626879,82.88502735860479,84.44544119549433,84.29772424751151,84.11324714733352,83.57041793282083,84.58290477330192,78.16525665344005,82.77997884114612,81.49887539139691

family_results.csv

@@ -6,9 +6,16 @@ PROTVEC,0.5305646335085417,0.6725893986313051,0.2612902633169396,0.3326731527283
 K-SEP,0.7707684963351132,0.846815485756415,0.8172360258734629,0.836519893244467,0.7261760680037939,0.5917747750847914,0.7808090056102062,0.7593536269714123,0.7901797160401044,0.5763135661159259,0.7387862796833773,0.83841059602649,0.7997364953886693,0.8253968253968254,0.6746347941567065,0.5667107001321003,0.7575757575757576,0.7444005270092227,0.766798418972332,0.5640686922060766,0.640042483529755,0.7644518262902564,0.7117106273573295,0.7419202966279433,0.6021646759391158,0.5517128109410392,0.6686420098498201,0.64491321640245,0.6852209363487277,0.5368763023568188,0.8343513182191383,0.8373161604255616,0.8078819733853588,0.8496218678044358,0.8185917939238945,0.2536613790550254,0.8570739057565402,0.8054479406807009,0.8088039665995872,0.816928278387335,0.8350923482849604,0.8463576158940397,0.8274044795783926,0.8518518518518519,0.8100929614873837,0.2523117569352708,0.855072463768116,0.8115942028985508,0.7997364953886693,0.8058124174372523,0.7429739110421127,0.761279379697906,0.7223093050439837,0.7588089619564022,0.714909489365554,0.3657239753753684,0.7685688874252543,0.6884332842844963,0.6940551479845067,0.7162393420163401,0.7646473429620361,0.7761837938645487,0.7894874347568283,0.8446813188085541,0.8449584205809447,0.803013581107586,0.8463539845635882,0.8113046471788579,0.7981538759487764,0.8003738120653137,0.7506596306068601,0.7509933774834437,0.7654808959156785,0.83994708994709,0.8419654714475432,0.7912813738441216,0.849802371541502,0.8221343873517787,0.8036890645586298,0.7846763540290621,0.64782337010478,0.6738313227111068,0.6797104139495174,0.7582545798984892,0.7531479595063091,0.6972558554338876,0.7549039328908572,0.705124893359371,0.6980392070510753,0.6995871270871004,0.7429386434532029,0.7815499818090516,0.7413079068788596,0.5799907562888491,0.7923082843980825,0.7588088555934794,0.7669993308126748,0.684144211710838,0.6292382214748218,0.7765619896385124,0.6992084432717678,0.7602649006622516,0.7562582345191041,0.5568783068783069,0.7861885790172642,0.7727873183619551,0.7602108036890646,0.6574440052700923,0.5876152832674572,0.7635402906208718,0.581101119599981,0.6767810704943809,0.6021953797806435,0.4976956640508178,0.6886735959654415,0.6577457041596863,0.6507739082654157,0.5768935489563931,0.4971721315686905,0.6408515754251058
 MUT2VEC,0.5972968500725933,0.6212917409537195,0.5632939083257605,0.6001870030831633,0.5710526414763588,0.5445902273675857,0.5803029641874369,0.566667743577911,0.5384062224184304,0.5714537431445593,0.5757997218358831,0.6082621082621082,0.5394366197183098,0.5852272727272727,0.5483870967741935,0.5214384508990318,0.5568022440392707,0.5477178423236515,0.5147679324894515,0.543661971830986,0.3946820541267777,0.4405997550460648,0.337415881653588,0.3715536226130108,0.3611233663105448,0.3602672499821672,0.3844675563372017,0.3508138226559532,0.3318767036144481,0.3616545306926499,0.5753539894827319,0.6041433062079811,0.5600049559225876,0.5610437487162041,0.5528953531395511,0.6054990193539659,0.613811635182693,0.5850387676644613,0.5478645104638878,0.5800066467524869,0.5549374130737135,0.584045584045584,0.5408450704225352,0.5383522727272727,0.5259467040673211,0.5905947441217151,0.5960729312762973,0.5670816044260027,0.5246132208157525,0.5605633802816902,0.3722198860141415,0.415504469630188,0.3325368936842853,0.3422718172704385,0.3476302152537939,0.3887458944086198,0.4088221925337235,0.3597203256706503,0.3279757884185098,0.3600163765042576,0.5685980880659018,0.6139586364497823,0.5694277342424642,0.5949767339800145,0.5792132279015504,0.567455576544595,0.5744347213807187,0.6072211163111618,0.5437068604452487,0.594246898454572,0.5438108484005564,0.594017094017094,0.5492957746478874,0.5866477272727273,0.5610098176718092,0.5435684647302904,0.5483870967741935,0.5947441217150761,0.5218002812939522,0.5746478873239437,0.3683762650884453,0.4223636654226833,0.3454982916509446,0.35555812627147,0.3456582796711991,0.371654134700872,0.3740323063693376,0.3724002525742787,0.3305387238235145,0.3758425952038015,0.6040863748457491,0.6039811143339084,0.5864407886638312,0.5787166987805588,0.575079718536896,0.6017662202744752,0.6119015357442268,0.5951876206460072,0.5414239865769832,0.5954263299117779,0.5855354659248957,0.5883190883190883,0.5633802816901409,0.5681818181818182,0.5539971949509116,0.5878284923928078,0.5960729312762973,0.5753803596127247,0.5189873417721519,0.5859154929577465,0.3906381223935248,0.3874656449620068,0.348403972515423,0.3212855666288337,0.3428862494023493,0.3738957607750162,0.3872411195891815,0.3793083797949313,0.326232387483693,0.3595297705386814
 GENE2VEC,0.4921167791459459,0.4911711232747838,0.442840908521379,0.5302170286165299,0.4756182140151972,0.5045452462914785,0.5059174428063758,0.5192143282457437,0.5108648051328027,0.5059883021455827,0.4607843137254901,0.4493580599144079,0.4097421203438395,0.5035460992907801,0.4455732946298984,0.4814814814814814,0.4679300291545189,0.4831460674157303,0.4855491329479768,0.4808510638297872,0.2212171636069296,0.2816753447152443,0.2409397032052123,0.3044183706479436,0.2577273433154146,0.265050295951355,0.2908296467833845,0.293156692025043,0.2621437895416987,0.2838064110727634,0.4608269207497631,0.5300846056656962,0.4478530081619495,0.5319042298841716,0.482093823241269,0.5053840509658007,0.5220804514630119,0.5460100206603734,0.5227004664397356,0.4949322321102873,0.42296918767507,0.5021398002853067,0.4183381088825215,0.5035460992907801,0.4470246734397677,0.4829059829059829,0.4825072886297376,0.5126404494382022,0.4956647398843931,0.4680851063829787,0.2185853129604495,0.2965625443878595,0.2549723441921469,0.3074781266803573,0.2361835198290729,0.2690883152775349,0.2580653100242669,0.3056928980463829,0.2691334378044159,0.2932996594396422,0.4516658894134094,0.4693754578374234,0.4817932165032286,0.5097189721008872,0.440712221957744,0.4832653056660145,0.5239602407738158,0.5148971520861348,0.4905044178444681,0.5213659948793088,0.4145658263305322,0.4379457917261055,0.4555873925501432,0.4794326241134752,0.4049346879535558,0.4558404558404558,0.4810495626822157,0.476123595505618,0.4609826589595375,0.502127659574468,0.2023076753971323,0.2713756777109278,0.2619848984980565,0.278456547729111,0.2204256697198509,0.260270035756347,0.2943765595815163,0.2928415908711408,0.249823988542366,0.2969895463684787,0.4115374941656392,0.4335224457282388,0.4497517381840182,0.4763217580837401,0.4200560391829552,0.4893493665974265,0.4576957918290354,0.4740825524694084,0.4421295251554093,0.4858874190043872,0.3725490196078431,0.3965763195435092,0.4126074498567335,0.4326241134751773,0.3759071117561683,0.4572649572649572,0.4067055393586006,0.4269662921348314,0.4017341040462427,0.4524822695035461,0.1851096387874127,0.2366559371446337,0.2163563254804497,0.2366579773202624,0.1702199560099112,0.2246194424638159,0.2188029634246492,0.2339054022008184,0.1978336652593506,0.2465593355841842
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 TCGA-EMBEDDING,0.4816481578742707,0.4808127219142234,0.43552920372157,0.4324169731021579,0.5177795068982821,0.4811228502828237,0.5404820217169857,0.4854285715933477,0.4885163691788489,0.4869191394241813,0.46524064171123,0.4577181208053691,0.4166666666666667,0.408355795148248,0.4993178717598908,0.4806408544726301,0.527027027027027,0.4587280108254398,0.4871794871794871,0.4577181208053691,0.2286968580619686,0.2601353434482007,0.2303129674213582,0.2363119491684308,0.2635557621961782,0.2396275659502585,0.2953728434963636,0.2212758562351006,0.2388531251398702,0.2619123553866644,0.5179360844144525,0.5010154795099835,0.3867224690820816,0.4906671095660554,0.3715131578498087,0.478951272667216,0.5112496675291254,0.4887682683271611,0.4977715003414401,0.5042957966850216,0.5280748663101604,0.4832214765100671,0.3817204301075269,0.4703504043126684,0.3506139154160982,0.4512683578104139,0.4986486486486486,0.4614343707713126,0.4844804318488529,0.4805369127516778,0.2517130274911934,0.2617848501866382,0.2085862813211724,0.2502111803301788,0.2112698877893442,0.2461173469604984,0.2772452982636768,0.2405989099239982,0.2432239816880598,0.2527651223441314,0.47646371416941,0.5085934382407308,0.4451726856880728,0.4644055254664764,0.5184127552298581,0.521442845682385,0.437254896868555,0.4852926658620127,0.4898587239490579,0.5010462085820022,0.4451871657754011,0.4885906040268456,0.4193548387096774,0.4501347708894879,0.5266030013642565,0.5046728971962616,0.4162162162162162,0.456021650879567,0.4750337381916329,0.4859060402684563,0.237415689088743,0.2786070332018291,0.239146673130236,0.2406681821408777,0.2673935384068321,0.2696342242118523,0.2488946604886648,0.2352555136447007,0.2301510303536447,0.2462447180257804,0.4794543797701664,0.4232494738205696,0.4850823375195657,0.4645961232803158,0.3808684429835929,0.4541563611190023,0.5059291262217156,0.5183898751928784,0.3670337673410934,0.4508692547818999,0.4893048128342246,0.4053691275167785,0.4811827956989247,0.4501347708894879,0.3356070941336971,0.4245660881174899,0.4959459459459459,0.5128552097428958,0.321187584345479,0.425503355704698,0.2216484285607611,0.184078568526175,0.2165368225991113,0.2358236229421344,0.1443353101743842,0.1966312339178509,0.2424860379231255,0.2308174236968389,0.1216626247679994,0.1907291379105412
 PFAM,0.9023363590977108,0.939402974495418,0.922519630964391,0.9261215722045468,0.9231572232430884,0.9158411896662872,0.9160363549105096,0.9175623511131872,0.9148236237014804,0.915605660125817,0.906578947368421,0.9407894736842104,0.925,0.9289473684210526,0.9263157894736842,0.9223684210526316,0.9197368421052632,0.9210526315789472,0.9210526315789472,0.9210526315789472,0.8456261564919587,0.9061110854329156,0.8760749683616543,0.8845651315199907,0.8805476772991526,0.8770698795818221,0.866578953607524,0.8661081232797727,0.8732716117811117,0.8738010272200925,0.9019198478997112,0.9303443215842196,0.921285794237023,0.9291947972557448,0.9200001355214578,0.9129369765184888,0.9144691982246838,0.9067158029173132,0.9058841213886238,0.9123325564515498,0.906578947368421,0.9328947368421052,0.9236842105263158,0.9315789473684212,0.9236842105263158,0.9197368421052632,0.9184210526315788,0.911842105263158,0.913157894736842,0.9184210526315788,0.8456636843082973,0.8936193970378093,0.8738277283175342,0.888891796190474,0.8763192812346792,0.8727037469125691,0.8643920704337783,0.8505849888457293,0.8605596897789758,0.8697992926504299,0.9032074600621786,0.9352857076274396,0.9163616338149082,0.9273463025952084,0.9220893728223252,0.9162678008814628,0.912068769138675,0.9086997815844684,0.9087160317752424,0.915974258372718,0.906578947368421,0.936842105263158,0.9197368421052632,0.9302631578947368,0.925,0.9223684210526316,0.9157894736842104,0.911842105263158,0.9144736842105264,0.9210526315789472,0.8455424756064035,0.8998212440602317,0.8678609233209615,0.8867263517552867,0.8783307128463217,0.8766810641443967,0.8597561627562716,0.8505811055210875,0.8618925947394132,0.8735628975928117,0.8721865457109066,0.8702459288466918,0.7494578831075022,0.8842235965840995,0.8631049030841518,0.8732181441498759,0.8650854942842877,0.7958896615361718,0.8533634299481123,0.805566481017233,0.8789473684210526,0.8763157894736842,0.7105263157894737,0.8934210526315789,0.8710526315789474,0.8868421052631579,0.8776315789473684,0.8131578947368421,0.8657894736842106,0.8197368421052632,0.7979127190796615,0.8014150313493293,0.6261300707101483,0.8256736644883115,0.7873949964651665,0.8200373701629834,0.7960499693502245,0.6706743723984571,0.78099143619247,0.7033677712093329
 CPC-PROT,0.7082535684530981,0.7688240510166273,0.7084753714874844,0.7189775180588438,0.7660215073015073,0.7168936626706657,0.7524756742406031,0.6732940234328709,0.6920490297477548,0.7285645873490343,0.6805929919137467,0.7553763440860215,0.6751336898395722,0.7046070460704607,0.76,0.7332439678284183,0.7366310160427807,0.6414342629482072,0.6613545816733067,0.7687165775401069,0.5548350785195949,0.6387987051616691,0.5539169360949447,0.590556129410376,0.6278357026527832,0.6002159577610121,0.5956735608646982,0.5200501722768692,0.5472810930169619,0.6230380998006326,0.6939847750470188,0.7289953269902971,0.7357340667577342,0.7758335641717232,0.7671043227431442,0.6336926420045076,0.6878090928205091,0.6460582376220907,0.691432047266941,0.7496412404931395,0.6644204851752021,0.7043010752688172,0.7219251336898396,0.7737127371273713,0.7653333333333333,0.6179624664879356,0.6671122994652406,0.6148738379814077,0.6706507304116865,0.7593582887700535,0.5258434461531866,0.5862195339821108,0.582206439379967,0.6599309732231983,0.6349159734957205,0.5066176933298738,0.5493967808959722,0.502961351578401,0.5476007599253131,0.6203765354179901,0.7215868467285715,0.7786175110130976,0.766300436977754,0.7824810829264481,0.7102537311212409,0.7555207221706635,0.7614093117578571,0.7121293912675807,0.6786690043999806,0.76568706833869,0.7102425876010782,0.7728494623655914,0.7593582887700535,0.7899728997289973,0.688,0.7546916890080428,0.7580213903743316,0.6932270916334662,0.6600265604249668,0.7647058823529411,0.5746731026344988,0.6472568289441236,0.6269593954171394,0.6736283869038563,0.5594650055424583,0.6206672085921789,0.6213761276645129,0.5571176624388319,0.5435213267895703,0.6335183255577123,0.7412755395536784,0.7303189503974107,0.6903001294315152,0.6607537980880607,0.7184383242308505,0.7415646084894141,0.7217779634403676,0.7375448520169702,0.683931895471227,0.7326799993111769,0.7520215633423181,0.7258064516129032,0.660427807486631,0.6436314363143631,0.7066666666666667,0.7640750670241286,0.7152406417112299,0.7450199203187251,0.6427622841965471,0.7459893048128342,0.5870224996717051,0.5953604868616736,0.5082371677796159,0.5374960363030319,0.5779936507069865,0.6187220794734309,0.5691783801540423,0.5828172002702527,0.5020314642776607,0.5971782167652482
 ESM1B,0.933631469556359,0.9600768938998946,0.9080210788613654,0.9375791956131811,0.9511599950175716,0.9111734735243412,0.9416432062999448,0.9125658158076828,0.945647361921182,0.93440606965358,0.9339622641509434,0.961021505376344,0.9024064171122996,0.9363143631436316,0.9506666666666668,0.9048257372654156,0.9425133689839572,0.9083665338645418,0.9442231075697212,0.9371657754010696,0.891436587090678,0.9389741243716484,0.8560545175581632,0.9006166252019523,0.9213254722617537,0.8611025123558189,0.905667369998734,0.863544251116213,0.9122708308535424,0.8996448493674425,0.939611389871183,0.9318516758560956,0.9464073105523044,0.9217716424855524,0.9323298726315324,0.9496747517290034,0.9430487872606598,0.9473403419970838,0.9066677326495984,0.940221435736971,0.9393530997304582,0.9260752688172044,0.946524064171123,0.9159891598915988,0.9293333333333332,0.950402144772118,0.9438502673796793,0.9482071713147412,0.899070385126162,0.9398395721925134,0.9006584851425257,0.8935657435715886,0.9134797312459196,0.8750520274898942,0.8910867596918025,0.9205258675517348,0.9079184259243251,0.9132235137241054,0.8452863039981181,0.9045197735378644,0.9347110472873994,0.9586553038819992,0.9395743332533673,0.7441402968057809,0.9170412866553757,0.9417995630137682,0.8287568851417471,0.9553961008383252,0.9012819011118092,0.8570712608637906,0.9339622641509434,0.9583333333333334,0.9371657754010696,0.7140921409214093,0.9213333333333332,0.9436997319034852,0.7941176470588235,0.9548472775564408,0.8884462151394422,0.8181818181818182,0.8921212248958682,0.9350483942162552,0.900782642083502,0.6840293828269205,0.873134858971092,0.9099047652906386,0.7138432855154161,0.9251569367608748,0.8322589705814488,0.7564129571345682,0.906427896169995,0.9345812306252468,0.9180540227416444,0.929238233180962,0.9019476432730018,0.9235253114440034,0.9136544207298876,0.9120106218788604,0.9011902129138072,0.9107654984776395,0.908355795148248,0.9341397849462364,0.9171122994652406,0.929539295392954,0.8986666666666666,0.9222520107238604,0.9131016042780749,0.9083665338645418,0.903054448871182,0.9144385026737968,0.8487621331467847,0.8966606349355131,0.865482295870888,0.8856912048838793,0.8421859171502567,0.8776220420721631,0.8588421052792795,0.8535745736162391,0.8449358791114798,0.8621075328074009
 BERT-BFD,0.8504041305270115,0.8917967536598276,0.8779801970959836,0.8870818736740941,0.8845717131709258,0.8944678248729618,0.8727760570691984,0.8855131198037655,0.877072140779296,0.868468062459638,0.8436657681940701,0.8870967741935484,0.8716577540106952,0.8821138211382114,0.8826666666666667,0.8927613941018767,0.8676470588235294,0.8831341301460823,0.8751660026560425,0.8622994652406417,0.764534247240924,0.8293270089639267,0.8085348855561603,0.8232681333350785,0.814603286884178,0.8324525983383937,0.7924841584730162,0.8123386576216483,0.8047692889329876,0.7934410303732048,0.8414295201820772,0.8919283831694059,0.8849184300368286,0.8859282067921875,0.8582386331384108,0.8823988836977765,0.8731772250209052,0.888827866434581,0.8801675792251846,0.8753771414615872,0.8288409703504043,0.8897849462365591,0.8810160427807486,0.8821138211382114,0.848,0.8780160857908847,0.8703208556149733,0.8884462151394422,0.8791500664010624,0.8756684491978609,0.7500093472676481,0.831559004332997,0.8206390557321637,0.822262294072336,0.7767424263536964,0.8173621236124974,0.7986094261848556,0.8153653621863455,0.8101556319604669,0.8037385519346604,0.8654626341678262,0.8779818851867557,0.9126611487896076,0.8890216726416631,0.8792964947527093,0.8850929437888375,0.8680573812353197,0.8781005777480876,0.8658283677471644,0.8835870870729962,0.8611859838274932,0.8669354838709677,0.9117647058823528,0.8875338753387534,0.876,0.886058981233244,0.8636363636363636,0.8711819389110226,0.8605577689243028,0.8823529411764706,0.7860182465745271,0.8089835642351408,0.85830411145131,0.8272002663853223,0.8055314326570069,0.8195825975851925,0.7882288304476232,0.8054862165879205,0.7855955034095703,0.815638209412358,0.7880426926538437,0.8685275529102569,0.8583237028689982,0.886620067699476,0.8590969067335169,0.8736670593838202,0.8494821857723751,0.8700019414704976,0.8645978532511275,0.8430076193724833,0.7668463611859838,0.8575268817204301,0.8516042780748663,0.8834688346883469,0.8546666666666667,0.8672922252010724,0.8435828877005348,0.8685258964143426,0.8618857901726428,0.8355614973262032,0.6768854513559635,0.7957408916866008,0.7756920526142603,0.8202090400141003,0.7756431473709574,0.8014880285964225,0.7582545514270103,0.7876858005963767,0.7806529765018055,0.7556743798823118
-BERT-PFAM,0.8062973420578016,0.9131675184939623,0.8504911422664762,0.6447227054902567,0.857523923528542,0.8760782045047699,0.830765871452626,0.8615278882329196,0.8103396458341421,0.8778049305799565,0.7776280323450134,0.9139784946236559,0.8449197860962567,0.5899864682002707,0.8586666666666667,0.8780160857908847,0.8355614973262032,0.8592297476759628,0.7915006640106241,0.8770053475935828,0.6894043140336193,0.864260732845403,0.7698667201160972,0.5643180362352607,0.7765094790008359,0.8043890846823284,0.7364091075467548,0.7760031981534717,0.7193544466577265,0.8049704581286437,0.8850775756740862,0.9000610173511201,0.8552496827970846,0.861251765723773,0.8659907449515641,0.8550930920936323,0.8382071238489213,0.6908024789535361,0.826734313668584,0.8142405334448136,0.8881401617250674,0.9059139784946236,0.8475935828877005,0.8552097428958051,0.8706666666666667,0.8592493297587132,0.8302139037433155,0.6533864541832669,0.8193891102257637,0.7967914438502673,0.8138439805998006,0.8508797013781558,0.7723098977814462,0.7775607290486,0.7871752887564517,0.776839890089345,0.7422530465807382,0.5784375942885696,0.7417762830181569,0.7164435040330608,0.8346661161848826,0.7924117865728568,0.8327607275256027,0.8787727650489758,0.809555777519626,0.8744819930577681,0.7815790900988534,0.8465777660303211,0.8404401433272821,0.7315527862489906,0.8261455525606469,0.7688172043010753,0.8262032085561497,0.8755074424898511,0.8,0.8739946380697051,0.7526737967914439,0.8353253652058433,0.8366533864541833,0.7085561497326203,0.735573373471502,0.7096816180804525,0.7348813915963524,0.8086352670812812,0.7036170120277307,0.7999490472933432,0.6699891443171385,0.7517440557145354,0.749195506899893,0.6335512876711865,0.7719500696241204,0.8418778041636955,0.8585780702102543,0.8485763886974661,0.8325987119442493,0.7691786057163382,0.5822331501093588,0.8139008708673388,0.7448798959636868,0.8045317195798917,0.7533692722371967,0.8413978494623656,0.8622994652406417,0.8389715832205683,0.84,0.7453083109919572,0.5307486631016043,0.8087649402390438,0.699867197875166,0.7954545454545454,0.6612288443423838,0.7541400047946084,0.7713622841210804,0.756088781426199,0.7401488797273507,0.6560029997295332,0.4721256407632506,0.6980044487149403,0.6073435745157713,0.683282977624593
+BERT-PFAM,0.8062973420578016,0.9131675184939624,0.8504911422664762,0.6447227054902567,0.857523923528542,0.8760782045047699,0.830765871452626,0.8615278882329196,0.8103396458341421,0.8778049305799565,0.7776280323450134,0.913978494623656,0.8449197860962567,0.5899864682002707,0.8586666666666667,0.8780160857908847,0.8355614973262032,0.8592297476759628,0.7915006640106241,0.8770053475935828,0.6894043140336193,0.864260732845403,0.7698667201160972,0.5643180362352607,0.7765094790008359,0.8043890846823284,0.7364091075467548,0.7760031981534717,0.7193544466577265,0.8049704581286437,0.8850775756740862,0.9000610173511201,0.8552496827970846,0.861251765723773,0.8659907449515641,0.8550930920936323,0.8382071238489213,0.6908024789535361,0.826734313668584,0.8142405334448136,0.8881401617250674,0.9059139784946236,0.8475935828877005,0.8552097428958051,0.8706666666666667,0.8592493297587132,0.8302139037433155,0.6533864541832669,0.8193891102257637,0.7967914438502673,0.8138439805998006,0.8508797013781558,0.7723098977814462,0.7775607290486,0.7871752887564517,0.776839890089345,0.7422530465807382,0.5784375942885696,0.7417762830181569,0.7164435040330608,0.8346661161848826,0.7924117865728568,0.8327607275256027,0.8787727650489758,0.809555777519626,0.8744819930577681,0.7815790900988534,0.8465777660303211,0.8404401433272821,0.7315527862489906,0.8261455525606469,0.7688172043010753,0.8262032085561497,0.8755074424898511,0.8,0.8739946380697051,0.7526737967914439,0.8353253652058433,0.8366533864541833,0.7085561497326203,0.735573373471502,0.7096816180804525,0.7348813915963524,0.8086352670812812,0.7036170120277307,0.7999490472933432,0.6699891443171385,0.7517440557145354,0.749195506899893,0.6335512876711865,0.7719500696241204,0.8418778041636955,0.8585780702102543,0.8485763886974661,0.8325987119442493,0.7691786057163382,0.5822331501093588,0.8139008708673388,0.7448798959636868,0.8045317195798917,0.7533692722371967,0.8413978494623656,0.8622994652406417,0.8389715832205683,0.84,0.7453083109919572,0.5307486631016043,0.8087649402390438,0.699867197875166,0.7954545454545454,0.6612288443423838,0.7541400047946084,0.7713622841210804,0.756088781426199,0.7401488797273507,0.6560029997295332,0.4721256407632506,0.6980044487149403,0.6073435745157713,0.683282977624593
+ALBERT,0.9337980871906654,0.9601780479875311,0.9389327447885962,0.9500534206070624,0.9429721477702118,0.9440931588957652,0.9375990732399112,0.9318231582693008,0.9442654138939236,0.9357597813235564,0.9326145552560648,0.9596774193548387,0.9371657754010696,0.9498644986449865,0.9426666666666668,0.9436997319034852,0.9385026737967914,0.9309428950863212,0.9428950863213812,0.9358288770053476,0.8911987279641974,0.9371678500513756,0.9002621609769857,0.919597581113908,0.9073104507207738,0.9109846614987042,0.899005399585324,0.8864550648935162,0.9099648480579614,0.897153482841624,0.9335617080830418,0.9636348293504096,0.9434564301015188,0.9493545838882026,0.9325093306248806,0.9359550013999496,0.9299551323472924,0.9379965194265478,0.9435850603294892,0.9253918848060112,0.9339622641509434,0.9637096774193548,0.9438502673796793,0.948509485094851,0.932,0.935656836461126,0.93048128342246,0.9375830013280212,0.9428950863213812,0.929144385026738,0.8912690254768316,0.9429731416686497,0.9079650414652156,0.9178960819629944,0.8903791583788618,0.898362460318595,0.8860654499452577,0.8955398053173909,0.9092167289285892,0.8859603992188756,0.9335454267948758,0.947120099252792,0.9418302182568328,0.9485834027715836,0.9312089490578136,0.9289865232709827,0.9306814147526912,0.9374479618450472,0.9282367792067177,0.936354814005292,0.9339622641509434,0.9448924731182796,0.9411764705882352,0.9471544715447154,0.932,0.9329758713136728,0.93048128342246,0.9375830013280212,0.9243027888446216,0.9358288770053476,0.8917297130144903,0.9159353625356044,0.9045749552466408,0.9162493574198686,0.8893297493136464,0.8931639591393645,0.8859700813622193,0.8960867894420346,0.8854421151355009,0.8980127602602764,0.8936170513277136,0.9250590413018632,0.9131143291629226,0.9208705133240248,0.896671767183558,0.9113601776347556,0.9000988441477848,0.8902540367193017,0.9018509900129702,0.8796538322409245,0.8935309973045822,0.922043010752688,0.9144385026737968,0.91869918699187,0.8986666666666666,0.9142091152815014,0.9024064171122996,0.8884462151394422,0.901726427622842,0.8836898395721925,0.8260774075366468,0.8799746896105923,0.8582481019802191,0.8712493750572037,0.8333039916508703,0.8624406909133201,0.8384181454514037,0.8158526252882428,0.8416136657668128,0.8100549718827676
+BLAST,0.8994368147880927,0.8900966098323437,0.9226031093304592,0.8901212347122709,0.8754419228105058,0.8735424973543596,0.8824561185411313,0.8717787212872966,0.8916591094840742,0.90214396198527,0.9052631578947368,0.8763157894736842,0.9276315789473684,0.8802631578947369,0.8644736842105263,0.8618421052631579,0.8697368421052631,0.8592105263157894,0.8828947368421053,0.9092105263157896,0.8438460005623281,0.8313715476717919,0.8804477591956305,0.8271924785384245,0.8083409459436003,0.8041086062972486,0.8129518221672563,0.8002376870500116,0.8329250116015279,0.8546204687555067,0.8507005653918315,0.8780320850609193,0.8898411558787399,0.8778418185455173,0.862573297687121,0.8533068240001741,0.8619928638019226,0.8536655590786432,0.8802835956878616,0.868114434862799,0.8328947368421052,0.8618421052631579,0.8789473684210526,0.8657894736842106,0.85,0.8394736842105263,0.8460526315789474,0.8381578947368421,0.868421052631579,0.8552631578947368,0.7679540065119902,0.8125510945454688,0.8259695309487323,0.8097612007764673,0.7937791092786042,0.7784074457286377,0.7831392243736999,0.7711154552396787,0.8167306192805611,0.7986246403473813,0.8702200546944119,0.9271034861190576,0.8883284409657682,0.8786002826298277,0.871766302072326,0.867156153717053,0.8641129651772407,0.8593225633734544,0.8884957819450395,0.8678816611351273,0.8565789473684211,0.9289473684210526,0.8789473684210526,0.8671052631578947,0.8605263157894737,0.8552631578947368,0.8486842105263158,0.8460526315789474,0.8789473684210526,0.8565789473684211,0.7906577635123136,0.8871463074877645,0.821086091257117,0.8088066266580867,0.8060847141481162,0.7972673770615742,0.7834912634325748,0.7818990926630219,0.829219633982831,0.795128890165774,0.8437037232805314,0.7834482908779725,0.762204358323215,0.7870077313999712,0.7609916873678099,0.768001654583747,0.7696349007526726,0.740235648545399,0.7658028313122404,0.7608833663286035,0.8526315789473684,0.75,0.7276315789473684,0.7552631578947369,0.7302631578947368,0.7368421052631579,0.7368421052631579,0.7052631578947368,0.7315789473684211,0.7315789473684211,0.7521192058094764,0.6911028066858957,0.6440453428499832,0.6822528901561032,0.6708705789641752,0.6657176118285464,0.6615181913033591,0.634752618193219,0.6639998905208032,0.6524517316824477
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function_results.csv

@@ -7,8 +7,15 @@ K-SEP,,0.72519,0.75,0.74056,,0.83944,0.82587,0.87619,,0.89985,0.93055,0.9,,0.690
 MUT2VEC,,0.46483,0.50954,0.48667,,0.57691,0.61198,0.65714,,0.45881,0.42174,0.53056,,0.52797,0.67262,0.44753,,0.75805,0.76301,0.75654,,,,,,0.55642,0.62383,0.53443,,0.62147,0.73958,0.57669,,0.62049,0.66925,0.60122,,0.25087,0.19733,0.36667,,0.12667,0.095,0.20667,,0.49871,0.59977,0.5,,0.48455,0.67051,0.396,,0.46374,0.64746,0.38574,,0.562,0.60817,0.52927,,0.46721,0.53327,0.43371,,0.49314,0.54953,0.48084,,0.49694,0.53695,0.48602,,0.37143,0.42424,0.34546,,0.23704,0.28667,0.23111,,0.49448,0.54011,0.52727,,0.54751,0.60828,0.58446,,0.53141,0.65729,0.52519,,,,,,0.53155,0.59572,0.51064,,0.53722,0.60817,0.51012,,0.44251,0.51008,0.41492,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.33293,0.33155,0.32873,0.1,0.33333,0.45278,0.37033,0.33146,0.36496,0.41587,0.5,0.23111,0.34546,0.30364,0.40465,0.39477,0.28804,0.72121,0.39729,0.55714,0.37222,0.43056,0.49578,0.41342,0.52232
 GENE2VEC,,0.50382,0.55375,0.53889,,0.68548,0.65087,0.7381,,0.35766,0.54653,0.29167,,0.24096,0.44919,0.18572,,0.65908,0.67307,0.66499,,,,,,0.58835,0.60271,0.5898,,0.60329,0.62528,0.59597,,0.61038,0.64435,0.60769,,0.35333,0.38333,0.36,,0.34355,0.39333,0.32667,,0.45392,0.48519,0.44445,,0.40957,0.5472,0.35005,,0.38224,0.54224,0.31336,,0.45271,0.49027,0.44164,,0.49349,0.48935,0.50634,,0.54687,0.56703,0.54747,,0.51125,0.53092,0.50265,,0.4184,0.49515,0.38182,,0.40442,0.45333,0.38444,,0.45495,0.55545,0.44546,,0.54983,0.5782,0.59902,,0.49389,0.58938,0.5002,,,,,,0.54645,0.57488,0.53458,,0.67129,0.67167,0.68338,,0.47379,0.48082,0.47851,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.26279,0.29001,0.23407,0.24667,0.32667,0.35278,0.40471,0.3382,0.34841,0.39025,0.49374,0.32,0.34546,0.29455,0.5019,0.36803,0.27825,0.60124,0.16847,0.70476,0.43889,0.29167,0.46342,0.41767,0.46561
 TCGA-EMBEDDING,,0.26602,0.25398,0.33611,,0.50857,0.55564,0.54762,,0.31432,0.30458,0.35278,,0.0,0.0,0.0,,0.6028,0.62251,0.61693,,,,,,0.33307,0.47984,0.32214,,0.33711,0.47471,0.32578,,0.38895,0.55784,0.35695,,0.31278,0.30889,0.4,,0.33702,0.40333,0.34667,,0.45602,0.46224,0.51111,,0.2156,0.37259,0.15993,,0.16098,0.29561,0.11299,,0.28174,0.53315,0.24303,,0.32195,0.39775,0.30766,,0.42765,0.55638,0.40043,,0.37089,0.42064,0.37348,,0.24499,0.28364,0.29091,,0.45098,0.50365,0.48889,,0.35498,0.43151,0.38364,,0.49228,0.55016,0.58617,,0.44855,0.48293,0.50406,,,,,,0.42495,0.59701,0.4081,,0.5795,0.6014,0.62607,,0.29886,0.51387,0.22928,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.11527,0.1524,0.17432,0.17333,0.17333,0.39445,0.30991,0.28455,0.35151,0.39349,0.51447,0.35778,0.23637,0.18364,0.53576,0.30035,0.21064,0.52032,0.0,0.51429,0.26111,0.28056,0.2736,0.25782,0.31305
+XLNET,,0.67413,0.73769,0.65056,,0.81905,0.81309,0.84286,,0.87095,0.87812,0.90278,,0.80014,0.86549,0.79679,,0.88782,0.9526,0.84425,,,,,,0.85675,0.86612,0.87682,,0.81111,0.84059,0.82621,,0.8063,0.82374,0.8579,,0.26571,0.24533,0.31333,,0.20876,0.28133,0.25333,,0.52389,0.555,0.54444,,0.51743,0.60897,0.58734,,0.61567,0.77128,0.58309,,0.55436,0.71191,0.55193,,0.53005,0.77065,0.48401,,0.62537,0.80089,0.61565,,0.65541,0.76289,0.65232,,0.59345,0.59264,0.62909,,0.47399,0.61056,0.47556,,0.42807,0.42091,0.49818,,0.65321,0.74718,0.67737,,0.66426,0.73185,0.6709,,,,,,0.678,0.77617,0.65149,,0.69349,0.83169,0.64236,,0.5179,0.62714,0.54499,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.48257,0.28822,0.35489,0.18,0.15333,0.44444,0.46724,0.37598,0.60984,0.37636,0.44095,0.34222,0.59091,0.29455,0.54894,0.59166,0.38708,0.82085,0.68208,0.77619,0.50556,0.72778,0.72113,0.73947,0.71821
+T5,,0.78706,0.80727,0.79778,,0.94222,0.94921,0.94286,,0.92892,0.98,0.90278,,0.88731,0.91894,0.86092,,0.94421,0.94908,0.94027,,,,,,0.90851,0.93669,0.88811,,0.909,0.92885,0.8991,,0.90333,0.90899,0.90498,,0.6,0.66,0.58667,,0.24111,0.29333,0.24667,,0.70929,0.78625,0.68889,,0.62759,0.71451,0.5809,,0.73161,0.7892,0.68938,,0.66183,0.72323,0.6253,,0.72427,0.77336,0.69245,,0.82773,0.87208,0.80557,,0.77916,0.80217,0.76858,,0.66702,0.68637,0.68182,,0.56995,0.75982,0.51778,,0.49793,0.63358,0.49273,,0.7531,0.80509,0.73983,,0.724,0.80132,0.68651,,,,,,0.8274,0.85992,0.80657,,0.76613,0.81623,0.74735,,0.63682,0.68613,0.62034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.62643,0.48507,0.46566,0.24667,0.54667,0.66667,0.76274,0.60953,0.70797,0.56572,0.61791,0.51778,0.64545,0.45455,0.67039,0.74553,0.49018,0.93127,0.82446,0.88095,0.72778,0.90278,0.8676,0.86133,0.86259
+SEQVEC,,0.75999,0.8475,0.72333,,0.89143,0.88254,0.90476,,0.9196,0.955,0.90278,,0.85771,0.87978,0.84544,,0.94021,0.95076,0.93118,,,,,,0.91837,0.91524,0.92938,,0.89295,0.91168,0.88955,,0.90567,0.92487,0.89695,,0.46349,0.45867,0.50667,,0.251,0.34111,0.24667,,0.62183,0.64847,0.64167,,0.55082,0.65942,0.48998,,0.65378,0.74654,0.59361,,0.66046,0.67261,0.65955,,0.68429,0.69385,0.6923,,0.7602,0.8176,0.73136,,0.75664,0.78499,0.75108,,0.54363,0.58743,0.58182,,0.47182,0.58548,0.44889,,0.44668,0.59091,0.42727,,0.71936,0.76935,0.70901,,0.68106,0.78137,0.62891,,,,,,0.75446,0.78356,0.75588,,0.69262,0.76017,0.66833,,0.54198,0.59535,0.51391,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5237,0.40637,0.43259,0.20667,0.43333,0.64167,0.66596,0.5457,0.66311,0.51127,0.58238,0.36444,0.52727,0.37091,0.59619,0.64158,0.41411,0.91541,0.78545,0.87143,0.66389,0.85278,0.85376,0.86792,0.88207
 PFAM,,0.79611,0.92852,0.76278,,0.87714,0.85754,0.90476,,0.88627,0.95,0.85833,,0.85595,0.94403,0.78987,,0.90977,0.91674,0.91108,,,,,,0.913,0.95168,0.888,,0.88293,0.93605,0.86236,,0.79412,0.9492,0.71537,,0.28667,0.34,0.26,,0.31202,0.34333,0.34,,0.51232,0.74944,0.48056,,0.59182,0.74692,0.49563,,0.65403,0.82793,0.54611,,0.65279,0.74558,0.58257,,0.71437,0.7574,0.71694,,0.5874,0.74518,0.56255,,0.70376,0.79565,0.67409,,0.49756,0.63636,0.43636,,0.50419,0.74889,0.40667,,0.39995,0.50182,0.35273,,0.71319,0.75918,0.7038,,0.6909,0.749,0.67532,,,,,,0.61953,0.73473,0.61386,,0.72912,0.82487,0.69435,,0.4907,0.74679,0.43481,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5222,0.43592,0.41778,0.34,0.26,0.48056,0.53084,0.66738,0.65969,0.55804,0.60855,0.40667,0.43636,0.35273,0.68661,0.59797,0.38249,0.87836,0.77327,0.90476,0.68333,0.85833,0.8318,0.87777,0.71049
 CPC-PROT,,0.52361,0.50333,0.59333,,0.79749,0.7723,0.86667,,0.59553,0.67242,0.58056,,0.61797,0.77352,0.58591,,0.86338,0.87945,0.85765,,,,,,0.63533,0.66886,0.67907,,0.57429,0.66673,0.59351,,0.62802,0.70234,0.69815,,0.35609,0.369,0.46,,0.11667,0.188,0.11333,,0.48917,0.56405,0.51944,,0.29418,0.51601,0.25949,,0.40203,0.57281,0.3708,,0.46849,0.65415,0.45885,,0.46389,0.51491,0.50656,,0.47183,0.60483,0.45747,,0.497,0.59226,0.53213,,0.32859,0.36167,0.33455,,0.31763,0.36741,0.32222,,0.32596,0.36377,0.34182,,0.55962,0.71439,0.55496,,0.53595,0.68722,0.52611,,,,,,0.49075,0.60274,0.54696,,0.55517,0.55563,0.61004,,0.36785,0.5126,0.40741,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.26613,0.19053,0.25363,0.07333,0.26667,0.36944,0.30661,0.32955,0.36365,0.39067,0.50107,0.3,0.24182,0.15455,0.44948,0.33011,0.20328,0.81313,0.48007,0.67143,0.38889,0.48333,0.40563,0.51148,0.39274
 ESM1B,,0.68228,0.66889,0.72056,,0.86762,0.82659,0.93809,,0.86183,0.93611,0.82778,,0.78616,0.8777,0.77574,,0.91981,0.90026,0.94789,,,,,,0.81686,0.90021,0.80388,,0.87646,0.9423,0.84057,,0.84786,0.87056,0.84652,,0.356,0.45,0.34,,0.18571,0.26222,0.22,,0.52285,0.48464,0.59722,,0.57578,0.65506,0.62791,,0.67187,0.80767,0.6363,,0.5305,0.7126,0.51229,,0.55094,0.81284,0.52827,,0.70628,0.81752,0.71868,,0.69958,0.76869,0.73642,,0.56248,0.63051,0.57091,,0.38535,0.56691,0.36444,,0.58205,0.75614,0.58727,,0.73866,0.72588,0.80355,,0.68348,0.75501,0.70892,,,,,,0.7005,0.80327,0.74449,,0.72064,0.77008,0.72449,,0.50514,0.6022,0.54967,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.53659,0.39284,0.33383,0.15333,0.3,0.5,0.55089,0.41095,0.5581,0.43335,0.53247,0.27555,0.51636,0.40364,0.59787,0.5527,0.43369,0.86023,0.70955,0.77143,0.65833,0.80278,0.81408,0.72603,0.78307
 BERT-BFD,,0.82337,0.8007,0.86278,,0.74698,0.73254,0.77143,,0.88395,0.95648,0.85,,0.83441,0.90541,0.78409,,0.92685,0.92839,0.92645,,,,,,0.87619,0.90152,0.86381,,0.87285,0.89893,0.86561,,0.82082,0.85757,0.80967,,0.51686,0.55667,0.54667,,0.35733,0.55778,0.32,,0.69544,0.66359,0.74167,,0.54463,0.73023,0.47292,,0.65307,0.77909,0.57944,,0.65314,0.69569,0.63654,,0.64618,0.73711,0.61252,,0.72293,0.79811,0.69873,,0.71461,0.77796,0.69624,,0.56459,0.66818,0.53636,,0.62191,0.67056,0.64667,,0.4023,0.44,0.41636,,0.71224,0.81005,0.70602,,0.66161,0.79098,0.64153,,,,,,0.72659,0.78155,0.73706,,0.71325,0.77725,0.70506,,0.57427,0.61422,0.58978,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5193,0.41362,0.43409,0.24667,0.42667,0.59167,0.60503,0.52375,0.61977,0.53739,0.59329,0.51778,0.46182,0.24727,0.62506,0.64029,0.4265,0.90656,0.7608,0.5,0.75556,0.82778,0.81408,0.81183,0.75675
 BERT-PFAM,,0.80089,0.805,0.81778,,0.84127,0.84643,0.84286,,0.84791,0.89325,0.85278,,0.79589,0.80244,0.80839,,0.90155,0.88749,0.9265,,,,,,0.85521,0.90337,0.83122,,0.8621,0.86062,0.8795,,0.86806,0.87652,0.86742,,0.33508,0.39333,0.33333,,0.33667,0.47778,0.3,,0.76826,0.74722,0.81389,,0.42723,0.5515,0.42617,,0.52803,0.59847,0.60503,,0.53251,0.67317,0.52944,,0.57133,0.63635,0.57993,,0.65795,0.74784,0.62934,,0.65921,0.68655,0.70106,,0.49206,0.56243,0.50182,,0.52408,0.6137,0.52,,0.49822,0.68251,0.49091,,0.62975,0.69678,0.65629,,0.61529,0.71027,0.60002,,,,,,0.68245,0.76134,0.65085,,0.68569,0.73741,0.67917,,0.52134,0.51807,0.55899,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.30475,0.23688,0.32782,0.22667,0.33333,0.71667,0.55968,0.43469,0.5024,0.40085,0.41117,0.47556,0.44727,0.41636,0.55263,0.55501,0.35529,0.83398,0.67471,0.84286,0.77778,0.73056,0.78591,0.78213,0.8303
+ALBERT,,0.82605,0.85917,0.81278,,0.84857,0.84603,0.87143,,0.90278,0.9625,0.875,,0.87193,0.89749,0.85267,,0.93586,0.95685,0.91812,,,,,,0.91479,0.93843,0.90278,,0.90465,0.93619,0.88235,,0.87894,0.90966,0.87269,,0.45222,0.56333,0.45333,,0.41638,0.54167,0.39333,,0.53571,0.63542,0.52222,,0.6194,0.66011,0.60209,,0.71416,0.7585,0.68943,,0.6737,0.70048,0.66746,,0.70054,0.77782,0.66204,,0.77539,0.90687,0.70764,,0.74227,0.81251,0.71219,,0.59183,0.72623,0.55091,,0.56096,0.65037,0.54,,0.46137,0.57281,0.47455,,0.7429,0.77751,0.73641,,0.71154,0.74925,0.69029,,,,,,0.76648,0.89914,0.70518,,0.69418,0.79215,0.67297,,0.55506,0.63755,0.53309,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.58538,0.45823,0.46567,0.39333,0.33333,0.45,0.6727,0.58578,0.6509,0.51865,0.58891,0.49555,0.53273,0.34,0.52355,0.6723,0.43634,0.91274,0.80368,0.80476,0.72778,0.85,0.85352,0.87782,0.84609
+BLAST,,0.68935,0.82625,0.65056,,0.90476,0.90476,0.90476,,0.97222,0.98,0.975,,0.84964,0.91405,0.79753,,0.9037,0.91845,0.9019,,,,,,0.92355,0.92622,0.92787,,0.93553,0.94454,0.93524,,0.82035,0.96132,0.76427,,0.3581,0.4,0.36,,0.21389,0.3,0.16667,,0.50695,0.70694,0.50556,,0.60004,0.72563,0.51855,,0.65951,0.80884,0.56193,,0.63796,0.74377,0.56036,,0.71088,0.74523,0.71343,,0.57985,0.84346,0.47274,,0.73621,0.8528,0.65846,,0.4915,0.62727,0.43636,,0.48419,0.74889,0.38444,,0.41761,0.50243,0.39091,,0.71801,0.74232,0.71475,,0.69566,0.71552,0.69476,,,,,,0.57519,0.7466,0.49622,,0.74771,0.78577,0.76631,,0.45524,0.70624,0.35455,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.51946,0.42677,0.4237,0.16667,0.36,0.50556,0.4622,0.65957,0.63075,0.53797,0.59783,0.38444,0.43636,0.39091,0.74379,0.48437,0.30505,0.89502,0.75486,0.90476,0.60556,0.975,0.92677,0.91025,0.76427
+HMMER,,0.79519,0.93083,0.76278,,0.90476,0.90476,0.90476,,0.98333,1.0,0.975,,0.84565,0.86737,0.82894,,0.91649,0.91979,0.91539,,,,,,0.91231,0.90396,0.92474,,0.91898,0.91421,0.93005,,0.84966,0.8507,0.86244,,0.53178,0.58,0.55333,,0.39228,0.40944,0.42,,0.62244,0.71389,0.57222,,0.58192,0.59686,0.57721,,0.67444,0.71493,0.64185,,0.63868,0.66562,0.61553,,0.68176,0.67231,0.7025,,0.61752,0.67684,0.59714,,0.75825,0.77288,0.75326,,0.56979,0.6597,0.54545,,0.53291,0.69018,0.50889,,0.46356,0.47697,0.48182,,0.69804,0.70038,0.69932,,0.67518,0.66459,0.68773,,,,,,0.62427,0.67979,0.6067,,0.73065,0.73508,0.7425,,0.47122,0.55398,0.42202,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.54896,0.42263,0.42321,0.28667,0.47333,0.55,0.53973,0.58368,0.69176,0.46789,0.54453,0.46889,0.49091,0.39091,0.68148,0.53994,0.34384,0.89804,0.75815,0.90476,0.72778,0.95,0.89441,0.88735,0.84268
+UNIREP,,0.77111,0.77019,0.78778,,0.86762,0.84325,0.90476,,0.90157,0.96148,0.87778,,0.73787,0.82721,0.73102,,0.9175,0.89962,0.93944,,,,,,0.75523,0.83511,0.75272,,0.81263,0.83521,0.81711,,0.82193,0.90702,0.7789,,0.36711,0.39333,0.36667,,0.25022,0.35778,0.24667,,0.65117,0.70778,0.64445,,0.32787,0.67443,0.3158,,0.44386,0.61016,0.46069,,0.50611,0.64841,0.55504,,0.52942,0.59492,0.58048,,0.6148,0.67929,0.6483,,0.6246,0.70007,0.60509,,0.54503,0.54862,0.6,,0.50174,0.53889,0.53333,,0.30442,0.32439,0.31818,,0.60594,0.7075,0.63662,,0.62111,0.65128,0.69201,,,,,,0.55246,0.68015,0.60037,,0.62226,0.70531,0.63885,,0.50712,0.54994,0.55864,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.28106,0.24069,0.28198,0.24667,0.36667,0.59722,0.42698,0.41294,0.52976,0.34361,0.40217,0.46667,0.34545,0.24546,0.507,0.39033,0.34158,0.87236,0.58836,0.87143,0.73333,0.82778,0.70692,0.6396,0.75915

leaderboard_results.csv

@@ -12,4 +12,10 @@ CPC-PROT,0.0605,0.3541,-0.087,0.234,0.1091,0.1043,0.0275,0.2308,,,,,,,,,,,,,,,,,
 ESM1B,0.3847,0.0,0.3732,0.0,0.4152,0.0,0.391,0.0,,,,,,,,,,,,,,,,,0.7657,0.8324,0.8653,0.8376,0.4152,0.5333,0.6412,0.5463,0.4682,0.6098,0.7013,0.6317,0.5497,0.6585,0.7359,0.6719,0.9336,0.9321,0.8951,0.9359,0.9339,0.8965,0.8978,0.8864,0.8423,0.9151,0.9149,0.8636,0.4828,5.0019,,0.8915
 BERT-BFD,0.2919,0.0,0.4157,0.0,0.3235,0.0,0.3437,0.0,,,,,,,,,,,,,,,,,0.7667,0.8482,0.8727,0.8417,0.4867,0.6116,0.6996,0.5894,0.5062,0.6221,0.6941,0.6224,0.5865,0.6939,0.7555,0.6845,0.879,0.8748,0.8076,0.8762,0.8721,0.8046,0.8805,0.8767,0.8101,0.8561,0.8491,0.7728,0.5736,5.2118,,0.874
 BERT-PFAM,0.4965,0.0,0.2218,0.0022,0.2068,0.0019,0.3084,0.0014,,,,,,,,,,,,,,,,,0.7823,0.8466,0.8594,0.8533,0.4048,0.5351,0.6125,0.5465,0.4518,0.5811,0.6603,0.5823,0.5463,0.6543,0.7107,0.6607,0.8329,0.8226,0.7505,0.8393,0.8327,0.7558,0.8223,0.8104,0.7297,0.7868,0.7716,0.68,,,,
-SEQVEC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5331,5.2423,,0.8801
+ALBERT,0.2219,0.0006,0.3181,0.0000,0.3690,0.0000,0.3030,0.0002,,,,,,,,,,,,,,,,,0.8345,0.8854,0.9133,0.8735,0.5106,0.6255,0.7063,0.6011,0.5135,0.6355,0.7256,0.6129,0.6195,0.7155,0.7817,0.6958,0.9419,0.9414,0.9059,0.9395,0.9398,0.9026,0.9364,0.9360,0.8976,0.9033,0.9038,0.8437,0.4183,4.5728,,0.9071
+BLAST,0.1127,0.0776,0.0885,0.1674,0.3432,0.0000,0.1815,0.0817,,,,,,,,,,,,,,,,,0.8421,0.8749,0.9219,0.8571,0.4616,0.5559,0.6807,0.5020,0.4851,0.5731,0.6969,0.5298,0.5963,0.6680,0.7665,0.6296,0.8899,0.8837,0.8296,0.8676,0.8537,0.7958,0.8783,0.8678,0.8101,0.7742,0.7458,0.6719,,,,
+HMMER,0.1374,0.0313,0.3219,0.0000,0.1577,0.0131,0.2056,0.0148,,,,,,,,,,,,,,,,,0.8579,0.8908,0.9115,0.8880,0.5022,0.6110,0.6448,0.6037,0.4910,0.5957,0.6451,0.5868,0.6171,0.6992,0.7338,0.6928,0.8886,0.8821,0.8257,0.8786,0.8704,0.8104,0.8847,0.8775,0.8191,0.8048,0.7875,0.7075,,,,
+UNIREP,0.4213,0.0000,0.3248,0.0000,0.4695,0.0000,0.4052,0.0000,,,,,,,,,,,,,,,,,0.7499,0.8232,0.8599,0.8237,0.3760,0.4795,0.5962,0.4915,0.3803,0.5325,0.5883,0.5722,0.5020,0.6117,0.6815,0.6291,0.7739,0.7633,0.6871,0.8253,0.8168,0.7271,0.8064,0.7961,0.7094,0.7034,0.6829,0.6069,0.7321,6.3874,,0.8299
+XLNET,0.2271,0.0004,0.2549,0.0004,0.3090,0.0000,0.2637,0.0003,,,,,,,,,,,,,,,,,0.7114,0.8158,0.8472,0.8248,0.3729,0.4996,0.6120,0.5095,0.4466,0.5878,0.6673,0.5987,0.5103,0.6344,0.7088,0.6443,0.9040,0.9018,0.8490,0.8677,0.8586,0.7981,0.8511,0.8368,0.7857,0.8411,0.8272,0.7531,0.6068,5.7001,,0.8615
+T5,0.5664,0.0000,0.3985,0.0000,0.2127,0.0014,0.3925,0.0005,,,,,,,,,,,,,,,,,0.8573,0.9013,0.9224,0.8921,0.5686,0.6558,0.7127,0.6316,0.5884,0.6803,0.7561,0.6616,0.6715,0.7458,0.7970,0.7284,0.9410,0.9399,0.9045,0.9409,0.9396,0.9042,0.9404,0.9388,0.9036,0.9237,0.9221,0.8769,0.6035,5.4620,,0.8666
+SEQVEC,0.4238,0.0000,0.4242,0.0000,0.2436,0.0001,0.3639,0.0000,,,,,,,,,,,,,,,,,0.8366,0.8857,0.9084,0.8779,0.5021,0.6003,0.6470,0.5903,0.5010,0.6065,0.6817,0.5918,0.6132,0.6975,0.7457,0.6867,0.9150,0.9130,0.8630,0.9109,0.9092,0.8572,0.9102,0.9080,0.8557,0.8865,0.8828,0.8175,0.5331,5.2423,,0.8801

similarity_results.csv

@@ -6,9 +6,16 @@ PROTVEC,0.1854412229985308,0.0035106737585576,0.2058335849333736,0.0011949062421
 K-SEP,0.2222351644321201,0.0004449359524399,0.2943533697632057,2.8912597759133027e-06,0.2924105791926405,2.941553534464349e-06,0.2696663711293221,0.0001502562552501,,,,,,,,,,,,,,,,
 MUT2VEC,0.5462247913812742,2.6648168646769584e-20,0.3948878923766817,8.90249286171986e-10,0.5799222876570942,1.1825607450331126e-17,0.50701165713835,2.9674976600808085e-10,,,,,,,,,,,,,,,,
 GENE2VEC,0.1756222504801268,0.0057448955732791,0.359607993537279,6.832652069339137e-09,0.407953665862896,2.5324890595081728e-11,0.3143946366267673,0.0019149674770853,,,,,,,,,,,,,,,,
+XLNET,0.2270935836252544,0.0004255217205398,0.2549405428464779,0.0003996981320453,0.3090004241910071,2.5504237823583223e-06,0.2636781835542465,0.0002759234254558,,,,,,,,,,,,,,,,
+T5,0.5663605927245389,1.6651780868008073e-21,0.3984518032670328,1.3597547816366492e-08,0.2126939158889831,0.0013983844195919,0.392502103960185,0.0004661326723799,,,,,,,,,,,,,,,,
+SEQVEC,0.42379535007446245,3.836091946107342e-12,0.4242066438730631,4.02619839196181e-12,0.2436484071644948,0.00010961135917583849,0.3638834670373401,3.653712234604294e-05,,,,,,,,,,,,,,,,
 TCGA-EMBEDDING,0.0375448135213401,0.55782521975525,0.5033396964743626,6.003047049037164e-17,0.4822408636127631,8.634372908060867e-16,0.3410417912028219,0.185941739918417,,,,,,,,,,,,,,,,
 PFAM,0.3489483982233921,1.877722902620754e-08,0.510730419386372,1.114133339243178e-17,0.422215963284985,4.247926093523296e-12,0.4272982602982497,6.2604923211474655e-09,,,,,,,,,,,,,,,,
 CPC-PROT,0.0604542610865414,0.3541297210052825,-0.0869798610000177,0.2340072675203556,0.1090657842339456,0.1042913765903023,0.0275133947734897,0.2308094550386468,,,,,,,,,,,,,,,,
-ESM1B,0.384697625027269,8.870758807649626e-10,0.3731936223537567,1.2308236239109248e-07,0.4151856052080267,1.0531459683186124e-10,0.3910256175296842,4.135825095622976e-08,,,,,,,,,,,,,,,,
+ESM1B,0.384697625027269,8.870758807649622e-10,0.3731936223537567,1.2308236239109248e-07,0.4151856052080267,1.0531459683186124e-10,0.3910256175296842,4.135825095622976e-08,,,,,,,,,,,,,,,,
 BERT-BFD,0.2918631086847955,4.893623100352673e-06,0.4157201514424359,2.702080353630567e-09,0.3234845992693526,7.937879082606092e-07,0.3436892864655279,1.8967043629889704e-06,,,,,,,,,,,,,,,,
-BERT-PFAM,0.49648612931548936,3.732414283758915e-16,0.2217707389039976,0.002162915012843233,0.20682666170334332,0.0019036632513820377,0.3083611766409434,0.0013555260880752148,,,,,,,,,,,,,,,,
+BERT-PFAM,0.4964861293154893,3.732414283758915e-16,0.2217707389039976,0.0021629150128432,0.2068266617033433,0.001903663251382,0.3083611766409434,0.0013555260880752,,,,,,,,,,,,,,,,
+ALBERT,0.2218813721583892,0.0005801073837487,0.3181002150766988,8.174677802601285e-06,0.3690126305036619,1.3363892045333629e-08,0.3029980725795833,0.0001960984751477,,,,,,,,,,,,,,,,
+BLAST,0.1127460653100103,0.0775674407393031,0.0884833522711429,0.1673988859627581,0.3431671202767732,3.1135714073061366e-08,0.1814655126193088,0.0816554526125918,,,,,,,,,,,,,,,,
+HMMER,0.1373599246282869,0.0312674758751548,0.3218542802568603,2.6085514590925364e-07,0.1577102930764373,0.0130798221788381,0.2056414993205282,0.0147825196363796,,,,,,,,,,,,,,,,
+UNIREP,0.42133274757518285,5.254792153325089e-12,0.3247590759614522,2.0048389618732375e-07,0.4695106024457135,6.036878830381285e-15,0.40520080866078284,6.682971900545196e-08,,,,,,,,,,,,,,,,